BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F08SP1|AL427509
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1753 0.0
>3x_Contig1781
Length = 20717
Score = 1753 bits (880), Expect = 0.0
Identities = 911/922 (98%), Gaps = 3/922 (0%)
Strand = Plus / Minus
Query: 1 tcgcctttggcatnttttgcttctccagtagaagtttcctgcaccgtgcccgccgcaaat 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17868 tcgcctttggcat-ttttgcttctccagtagaagtttcctgcaccgtgcccgccgcaaat 17810
Query: 61 ggtttcatagtatccaaatccttcgttaccgaag-tgaagttgttacaatcgccttggga 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 17809 ggtttcatagtatccaaatccttcgttaccgaaggtgaagttgttacaatcgccttggga 17750
Query: 120 atcagctgacacttgtaaagtctttaggatcacatcggtgactctttgtgaagtcatcac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17749 atcagctgacacttgtaaagtctttaggatcacatcggtgactctttgtgaagtcatcac 17690
Query: 180 attgccgcccaccacagccgcaccttgtcttggcgatagtacgcyaccctttgggattat 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 17689 attgccgcccaccacagccgcaccttgtcttggcgatagtacgctaccctttgggattat 17630
Query: 240 cacatcgactgggtccagacagccttggttcaatgggatctcttcatccacgagacaccg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17629 cacatcgactgggtccagacagccttggttcaatgggatctcttcatccacgagacaccg 17570
Query: 300 caacacgtacaacgtcgcagaatacgttatcgcttctggtgcgttcaagttcccatacac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17569 caacacgtacaacgtcgcagaatacgttatcgcttctggtgcgttcaagttcccatacac 17510
Query: 360 ttgaggtgttgttcctgtgaagtcgaacgtatatttgtcgttccttgggtccaatgtcac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17509 ttgaggtgttgttcctgtgaagtcgaacgtatatttgtcgttccttgggtccaatgtcac 17450
Query: 420 tttcaagtatatcttggtaccgtcgtccatgaagtcatgtgactgavattggcacacgga 479
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 17449 tttcaagtatatcttggtaccgtcgtccatgaagtcatgtgactgaaattggcacacgga 17390
Query: 480 atcgatgtcaccgcggttcatctgtaatgataacttgttcaaagtcttcttcaccgtatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17389 atcgatgtcaccgcggttcatctgtaatgataacttgttcaaagtcttcttcaccgtatc 17330
Query: 540 gctggcattcgattggrtcgcatacatgtatctytcgatctctttgaatccatactcttt 599
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 17329 gctggcattcgattggatcgcatacatgtatctttcgatctctttgaatccatactcttt 17270
Query: 600 cactagttctccgactaacaggatcccctttgtgttggcggcgatttgggccttcaaatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17269 cactagttctccgactaacaggatcccctttgtgttggcggcgatttgggccttcaaatc 17210
Query: 660 ggatacgttgtcagcaagcttacgcgacccactacaaccagggtactgtgccggttcatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17209 ggatacgttgtcagcaagcttacgcgacccactacaaccagggtactgtgccggttcatc 17150
Query: 720 gaaaaacaatttgacgactttcgcttcgtcgaatataccatcttctaccaacttctcact 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17149 gaaaaacaatttgacgactttcgcttcgtcgaatataccatcttctaccaacttctcact 17090
Query: 780 gtatatggsggcaccttcctcgtacaactctcttgaaaatgggggsatggaaccaggtaa 839
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 17089 gtatatggcggcaccttcctcgtacaactctcttgaaaatgggggcatggaaccaggtaa 17030
Query: 840 ggatccgccgatatctgcatgatgcgctcttgacgctacatagaacaagatacgagtcgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17029 ggatccgccgatatctgcatgatgcgctcttgacgctacatagaacaagatacgagtcgc 16970
Query: 900 atcttttgggggcgracgctgg 921
||| ||||||| || |||||||
Sbjct: 16969 atc-tttggggtcgaacgctgg 16949
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4481
Number of Sequences: 1807
Number of extensions: 4481
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)